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Publications

Year Title Journal Authors
2017 Thiol-linked alkylation of RNA to assess expression dynamics. Nat Methods Herzog, VA., Reichholf, B., Neumann, T., Rescheneder, P., Bhat, P., Burkard, TR., Wlotzka, W., von Haeseler, A., Zuber, J., Ameres, SL.
2016 Molecular basis for cytoplasmic RNA surveillance by uridylation-triggered decay in Drosophila. EMBO J Reimão-Pinto, MM., Manzenreither, RA., Burkard, TR., Sledz, P., Jinek, M., Mechtler, K., Ameres, SL.
2016 Genetic and mechanistic diversity of piRNA 3'-end formation. Nature Hayashi, R., Schnabl, J., Handler, D., Mohn, F., Ameres, SL., Brennecke, J.
2015 Approaching the Golden Fleece a Molecule at a Time: Biophysical Insights into Argonaute-Instructed Nucleic Acid Interactions. Mol Cell Herzog, VA., Ameres, SL.
2015 Uridylation of RNA Hairpins by Tailor Confines the Emergence of MicroRNAs in Drosophila. Mol Cell Reimão-Pinto, MM., Ignatova, V., Burkard, TR., Hung, JH., Manzenreither, RA., Sowemimo, I., Herzog, VA., Reichholf, B., Fariña-Lopez, S., Ameres, SL.
2015 Selective Suppression of the Splicing-Mediated MicroRNA Pathway by the Terminal Uridyltransferase Tailor. Mol Cell Bortolamiol-Becet, D., Hu, F., Jee, D., Wen, J., Okamura, K., Lin, CJ., Ameres, SL., Lai, EC.
2013 Diversifying microRNA sequence and function. Nat Rev Mol Cell Biol Ameres, SL., Zamore, PD.
2012 Long-term, efficient inhibition of microRNA function in mice using rAAV vectors. Nat Methods Xie, J., Ameres, SL., Friedline, R., Hung, JH., Zhang, Y., Xie, Q., Zhong, L., Su, Q., He, R., Li, M., Li, H., Mu, X., Zhang, H., Broderick, JA., Kim, JK., Weng, Z., Flotte, TR., Zamore, PD., Gao, G.
2011 The 3'-to-5' exoribonuclease Nibbler shapes the 3' ends of microRNAs bound to Drosophila Argonaute1. Curr Biol Han, BW., Hung, JH., Weng, Z., Zamore, PD., Ameres, SL.
2011 MicroRNA-regulated, systemically delivered rAAV9: a step closer to CNS-restricted transgene expression. Mol Ther Xie, J., Xie, Q., Zhang, H., Ameres, SL., Hung, JH., Su, Q., He, R., Mu, X., Seher Ahmed, S., Park, S., Kato, H., Li, C., Mueller, C., Mello, CC., Weng, Z., Flotte, TR., Zamore, PD., Gao, G.
2011 Target RNA-directed tailing and trimming purifies the sorting of endo-siRNAs between the two Drosophila Argonaute proteins. RNA Ameres, SL., Hung, JH., Xu, J., Weng, Z., Zamore, PD.
2010 Target RNA-directed trimming and tailing of small silencing RNAs. Science Ameres, SL., Horwich, MD., Hung, JH., Xu, J., Ghildiyal, M., Weng, Z., Zamore, PD.
2010 Riding in silence: a little snowboarding, a lot of small RNAs. Silence Ameres, SL., Fukunaga, R.
2008 The impact of target site accessibility on the design of effective siRNAs. Nat Biotechnol Tafer, H., Ameres, SL., Obernosterer, G., Gebeshuber, CA., Schroeder, R., Martinez, J., Hofacker, IL.
2007 RNA chaperone activity of L1 ribosomal proteins: phylogenetic conservation and splicing inhibition. Nucleic Acids Res Ameres, SL., Shcherbakov, D., Nikonova, E., Piendl, W., Schroeder, R., Semrad, K.
2007 Mechanistische Analyse des humanen RNA-Interferenz-Effektor-Komplexes BioSpektrum Ameres, S.L.
2007 Molecular basis for target RNA recognition and cleavage by human RISC. Cell Ameres, SL., Martinez, J., Schroeder, R.
2006 Cleavage of the siRNA passenger strand during RISC assembly in human cells. EMBO Rep Leuschner, PJ., Ameres, SL., Kueng, S., Martinez, J.
2005 Inducible DNA-loop formation blocks transcriptional activation by an SV40 enhancer. EMBO J Ameres, SL., Drueppel, L., Pfleiderer, K., Schmidt, A., Hillen, W., Berens, C.